Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ccel_3306TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: sha:SH2634 hypothetical protein; Belongs to the ParB family. (449 aa)    
Predicted Functional Partners:
Ccel_3164
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: lrf:LAR_0100 chromosome partitioning protein ParA.
 
 
 0.896
Ccel_0007
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: cth:Cthe_2377 chromosome segregation ATPase.
 
 
 0.895
Ccel_3304
PFAM: Primase 2; KEGG: spj:MGAS2096_Spy0567 ATPase.
 
     0.773
Ccel_3305
KEGG: bce:BC1869 phage protein.
       0.773
Ccel_3308
Phage protein; KEGG: spj:MGAS2096_Spy0564 phage protein.
 
     0.748
Ccel_3307
PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: spj:MGAS2096_Spy0565 DNA/RNA helicase.
       0.714
Ccel_3310
PFAM: SMC domain protein; KEGG: spj:MGAS2096_Spy0560 chromosome segregation ATPases.
 
     0.689
Ccel_3309
Phage protein; KEGG: spj:MGAS2096_Spy0561 phage protein.
 
     0.686
rsmG
Methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.654
Ccel_3163
TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: aoe:Clos_1923 nuclease; Belongs to the ParB family.
  
     0.612
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.