Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ccel_3356Peptidase C26; PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: cth:Cthe_2162 peptidase C26. (238 aa)    
Predicted Functional Partners:
Ccel_0721
PFAM: peptidase M19 renal dipeptidase; KEGG: cth:Cthe_0756 thermostable dipeptidase.
     0.923
Ccel_3355
PFAM: MscS Mechanosensitive ion channel; KEGG: cth:Cthe_2511 MscS mechanosensitive ion channel.
 
     0.675
Ccel_3354
PFAM: protein of unknown function DUF951; KEGG: cth:Cthe_2512 hypothetical protein.
       0.600
Ccel_3353
KEGG: cth:Cthe_2514 hypothetical protein.
       0.556
Ccel_3357
PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: cth:Cthe_2164 rubredoxin-type Fe(Cys)4 protein.
       0.507
Ccel_3352
PFAM: Hemerythrin HHE cation binding domain protein; KEGG: cth:Cthe_1509 hypothetical protein.
       0.475
Ccel_3198
PFAM: iron-containing alcohol dehydrogenase; Aldehyde Dehydrogenase; KEGG: cdf:CD2966 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.418
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.