Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ccel_3449PFAM: Transketolase central region; Transketolase domain protein; KEGG: rpb:RPB_3807 acetoin dehydrogenase (TPP-dependent) beta chain. (346 aa)    
Predicted Functional Partners:
Ccel_3450
PFAM: dehydrogenase E1 component; KEGG: tpd:Teth39_0790 pyruvate dehydrogenase (acetyl-transferring).
 0.999
Ccel_0950
HI0933 family protein; PFAM: glucose-inhibited division protein A; HI0933 family protein; FAD dependent oxidoreductase; KEGG: tbd:Tbd_1475 hypothetical protein.
  
 0.988
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
   
 0.960
Ccel_1607
Electron transfer flavoprotein alpha subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: cno:NT01CX_1204 electron transfer flavoprotein, alpha subunit.
  
 
 0.869
Ccel_2571
PFAM: Citrate synthase; KEGG: mta:Moth_1122 methylcitrate synthase; Belongs to the citrate synthase family.
  
 0.767
Ccel_3198
PFAM: iron-containing alcohol dehydrogenase; Aldehyde Dehydrogenase; KEGG: cdf:CD2966 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.766
Ccel_3448
PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: pfu:PF1357 UDP-or dTTP-glucose 4-epimerase or 4-6-dehydratase.
     
 0.743
atpA
ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.
   
 0.734
Ccel_2331
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; KEGG: bsu:BSU17180 polyketide synthase of type I.
  
 
 0.728
Ccel_2176
TIGRFAM: aconitate hydratase; PFAM: aconitate hydratase domain protein; KEGG: cth:Cthe_3158 aconitate hydratase.
  
 0.723
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
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