STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rsxB_2Electron transport complex subunit RsxB. (271 aa)    
Predicted Functional Partners:
EUAN_02750
Dinitrogenase iron-molybdenum cofactor.
   
 0.958
EUAN_02780
Dinitrogenase iron-molybdenum cofactor.
 
   
 0.949
nifJ
Pyruvate-flavodoxin oxidoreductase.
    
 0.897
padF
NADH-dependent phenylglyoxylate dehydrogenase subunit delta.
 
    
0.859
minD_1
Septum site-determining protein MinD; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
 
 
   0.842
hndC_2
NADP-reducing hydrogenase subunit HndC.
    
  0.804
hndC_1
NADP-reducing hydrogenase subunit HndC.
    
  0.795
lpd
Dihydrolipoyl dehydrogenase.
     
 0.793
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
  0.792
sfrB
NADPH-Fe(3+) oxidoreductase subunit beta.
  
 
  0.785
Your Current Organism:
Andreesenia angusta
NCBI taxonomy Id: 39480
Other names: A. angusta, ATCC 43737, Eubacterium angustum, strain MK-1
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