Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
crtBAll-trans-phytoene synthase. (278 aa)    
Predicted Functional Partners:
crtN_2
Dehydrosqualene desaturase.
 
 
 0.944
crtP
Diapolycopene oxygenase.
 
 
 0.943
EUAN_07690
Farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
 
 0.932
crtN_1
Dehydrosqualene desaturase.
 
 
 0.889
EUAN_14610
Hypothetical protein.
    
 0.866
rps1
30S ribosomal protein S1; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
  
  
 0.807
gap
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
  
 0.802
hndC_2
NADP-reducing hydrogenase subunit HndC.
  
 
 0.782
uppS
Polycis-undecaprenyl-diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
   
 
 0.770
EUAN_14430
3 beta-hydroxysteroid dehydrogenase/delta 5-->4-isomerase.
 
 
 0.715
Your Current Organism:
Andreesenia angusta
NCBI taxonomy Id: 39480
Other names: A. angusta, ATCC 43737, Eubacterium angustum, strain MK-1
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