EUAN_03440 protein (Andreesenia angusta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

EUAN_03440

PHP domain protein. (215 aa)

Predicted Functional Partners:

nifJ

0.766

pyk

0.616

EUAN_03420

0.531

EUAN_03430

0.531

hisC2_1

0.500

hisC2_2

0.500

hisD

0.500

EUAN_01690

0.491

cheY_2

0.479

EUAN_03450

0.478

Your Current Organism:

Andreesenia angusta

NCBI taxonomy Id: 39480
Other names: A. angusta, ATCC 43737, Eubacterium angustum, strain MK-1

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EUAN_01690	EUAN_03440	EUAN_01690	EUAN_03440	Hypothetical protein.	PHP domain protein.	0.491
EUAN_01690	cheY_2	EUAN_01690	EUAN_01670	Hypothetical protein.	Chemotaxis protein CheY.	0.978
EUAN_03420	EUAN_03430	EUAN_03420	EUAN_03430	DNA-binding transcriptional regulator ModE.	Hypothetical protein.	0.773
EUAN_03420	EUAN_03440	EUAN_03420	EUAN_03440	DNA-binding transcriptional regulator ModE.	PHP domain protein.	0.531
EUAN_03430	EUAN_03420	EUAN_03430	EUAN_03420	Hypothetical protein.	DNA-binding transcriptional regulator ModE.	0.773
EUAN_03430	EUAN_03440	EUAN_03430	EUAN_03440	Hypothetical protein.	PHP domain protein.	0.531
EUAN_03440	EUAN_01690	EUAN_03440	EUAN_01690	PHP domain protein.	Hypothetical protein.	0.491
EUAN_03440	EUAN_03420	EUAN_03440	EUAN_03420	PHP domain protein.	DNA-binding transcriptional regulator ModE.	0.531
EUAN_03440	EUAN_03430	EUAN_03440	EUAN_03430	PHP domain protein.	Hypothetical protein.	0.531
EUAN_03440	EUAN_03450	EUAN_03440	EUAN_03450	PHP domain protein.	Putative permease.	0.478
EUAN_03440	cheY_2	EUAN_03440	EUAN_01670	PHP domain protein.	Chemotaxis protein CheY.	0.479
EUAN_03440	hisC2_1	EUAN_03440	EUAN_09460	PHP domain protein.	Histidinol-phosphate aminotransferase 2; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.	0.500
EUAN_03440	hisC2_2	EUAN_03440	EUAN_13220	PHP domain protein.	Histidinol-phosphate aminotransferase 2; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.	0.500
EUAN_03440	hisD	EUAN_03440	EUAN_13230	PHP domain protein.	Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.	0.500
EUAN_03440	nifJ	EUAN_03440	EUAN_15060	PHP domain protein.	Pyruvate-flavodoxin oxidoreductase.	0.766
EUAN_03440	pyk	EUAN_03440	EUAN_14950	PHP domain protein.	Pyruvate kinase; Belongs to the pyruvate kinase family.	0.616
EUAN_03450	EUAN_03440	EUAN_03450	EUAN_03440	Putative permease.	PHP domain protein.	0.478
EUAN_03450	nifJ	EUAN_03450	EUAN_15060	Putative permease.	Pyruvate-flavodoxin oxidoreductase.	0.925
EUAN_03450	pyk	EUAN_03450	EUAN_14950	Putative permease.	Pyruvate kinase; Belongs to the pyruvate kinase family.	0.499
cheY_2	EUAN_01690	EUAN_01670	EUAN_01690	Chemotaxis protein CheY.	Hypothetical protein.	0.978