STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srrA_2Transcriptional regulatory protein SrrA. (228 aa)    
Predicted Functional Partners:
tcrY
Putative sensor histidine kinase TcrY.
 
 0.978
gmr_3
Cyclic di-GMP phosphodiesterase Gmr.
  
 0.925
phoR_3
Alkaline phosphatase synthesis sensor protein PhoR.
 
 0.924
yycG_1
Sensor histidine kinase YycG.
 
 0.921
yycG_2
Sensor histidine kinase YycG.
 
 0.918
phoR_2
Alkaline phosphatase synthesis sensor protein PhoR.
 
 0.891
yycG_3
Sensor histidine kinase YycG.
 
 0.890
baeS
Signal transduction histidine-protein kinase BaeS.
 
 0.883
phoR_4
Alkaline phosphatase synthesis sensor protein PhoR.
 
 0.881
zraS
Sensor protein ZraS.
 
 0.877
Your Current Organism:
Andreesenia angusta
NCBI taxonomy Id: 39480
Other names: A. angusta, ATCC 43737, Eubacterium angustum, strain MK-1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.