STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yycF_3Transcriptional regulatory protein YycF. (230 aa)    
Predicted Functional Partners:
phoR_4
Alkaline phosphatase synthesis sensor protein PhoR.
 0.982
gmr_3
Cyclic di-GMP phosphodiesterase Gmr.
  
 0.947
phoR_1
Alkaline phosphatase synthesis sensor protein PhoR.
 0.935
yycG_1
Sensor histidine kinase YycG.
 
 0.921
phoR_3
Alkaline phosphatase synthesis sensor protein PhoR.
 0.917
yycG_2
Sensor histidine kinase YycG.
 0.906
zraS
Sensor protein ZraS.
 
 0.901
phoR_2
Alkaline phosphatase synthesis sensor protein PhoR.
 0.900
baeS
Signal transduction histidine-protein kinase BaeS.
 0.896
EUAN_20810
FG-GAP repeat protein.
 
 
 0.896
Your Current Organism:
Andreesenia angusta
NCBI taxonomy Id: 39480
Other names: A. angusta, ATCC 43737, Eubacterium angustum, strain MK-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.