EUAN_21990 protein (Andreesenia angusta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

EUAN_21990

Hypothetical protein. (107 aa)

Predicted Functional Partners:

tmk_2

0.827

dnaX_2

0.818

speA_2

0.792

EUAN_21970

0.775

EUAN_22020

0.773

fumA

0.773

ttdA

0.752

EUAN_19830

0.570

pleD_3

0.548

EUAN_21960

0.532

Your Current Organism:

Andreesenia angusta

NCBI taxonomy Id: 39480
Other names: A. angusta, ATCC 43737, Eubacterium angustum, strain MK-1

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EUAN_19830	EUAN_21970	EUAN_19830	EUAN_21970	Hypothetical protein.	Hypothetical protein; PSP1 C-terminal conserved region.	0.446
EUAN_19830	EUAN_21990	EUAN_19830	EUAN_21990	Hypothetical protein.	Hypothetical protein.	0.570
EUAN_21960	EUAN_21970	EUAN_21960	EUAN_21970	Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	Hypothetical protein; PSP1 C-terminal conserved region.	0.628
EUAN_21960	EUAN_21990	EUAN_21960	EUAN_21990	Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	Hypothetical protein.	0.532
EUAN_21960	EUAN_22020	EUAN_21960	EUAN_22020	Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	NAD-dependent malic enzyme.	0.627
EUAN_21960	dnaX_2	EUAN_21960	EUAN_21980	Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	DNA polymerase III subunit tau.	0.589
EUAN_21960	fumA	EUAN_21960	EUAN_22030	Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	Fumarate hydratase class I, aerobic.	0.453
EUAN_21960	speA_2	EUAN_21960	EUAN_22010	Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	Arginine decarboxylase.	0.458
EUAN_21960	tmk_2	EUAN_21960	EUAN_22000	Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.	0.498
EUAN_21960	ttdA	EUAN_21960	EUAN_22040	Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	L(+)-tartrate dehydratase subunit alpha.	0.435
EUAN_21970	EUAN_19830	EUAN_21970	EUAN_19830	Hypothetical protein; PSP1 C-terminal conserved region.	Hypothetical protein.	0.446
EUAN_21970	EUAN_21960	EUAN_21970	EUAN_21960	Hypothetical protein; PSP1 C-terminal conserved region.	Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	0.628
EUAN_21970	EUAN_21990	EUAN_21970	EUAN_21990	Hypothetical protein; PSP1 C-terminal conserved region.	Hypothetical protein.	0.775
EUAN_21970	EUAN_22020	EUAN_21970	EUAN_22020	Hypothetical protein; PSP1 C-terminal conserved region.	NAD-dependent malic enzyme.	0.665
EUAN_21970	dnaX_2	EUAN_21970	EUAN_21980	Hypothetical protein; PSP1 C-terminal conserved region.	DNA polymerase III subunit tau.	0.786
EUAN_21970	fumA	EUAN_21970	EUAN_22030	Hypothetical protein; PSP1 C-terminal conserved region.	Fumarate hydratase class I, aerobic.	0.665
EUAN_21970	pleD_3	EUAN_21970	EUAN_22050	Hypothetical protein; PSP1 C-terminal conserved region.	Response regulator PleD.	0.465
EUAN_21970	speA_2	EUAN_21970	EUAN_22010	Hypothetical protein; PSP1 C-terminal conserved region.	Arginine decarboxylase.	0.673
EUAN_21970	tmk_2	EUAN_21970	EUAN_22000	Hypothetical protein; PSP1 C-terminal conserved region.	Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.	0.728
EUAN_21970	ttdA	EUAN_21970	EUAN_22040	Hypothetical protein; PSP1 C-terminal conserved region.	L(+)-tartrate dehydratase subunit alpha.	0.634