STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alaS_1Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. (879 aa)    
Predicted Functional Partners:
CUN74655.1
Protein of uncharacterised function (DUF3298).
   
 0.997
CUN99026.1
Uncharacterised protein.
   
 0.997
CUO50291.1
Predicted O-linked N-acetylglucosamine transferase%2C SPINDLY family.
  
 0.967
CUO29317.1
Uncharacterised protein.
   
 0.966
CUO29413.1
ATP-dependent transcriptional regulator.
   
 0.966
CUO42357.1
Spore coat associated protein JA (CotJA).
   
 0.966
CUP17776.1
Predicted ATPase.
   
 0.966
CUP17796.1
Uncharacterised protein.
   
 0.966
CUP37476.1
Uncharacterised protein.
   
 0.966
hhoA
Putative serine protease HhoA precursor.
   
 
  0.956
Your Current Organism:
Faecalicatena contorta
NCBI taxonomy Id: 39482
Other names: ATCC 25540, CCUG 52236, Catenabacterium contortum, DSM 3982, Eubacterium contortum, F. contorta, JCM 6483
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.