STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spoIIIAEStage III sporulation protein AE precursor. (396 aa)    
Predicted Functional Partners:
CUN89415.1
Stage III sporulation protein AD.
 
  
 0.995
CUN89481.1
Stage III sporulation protein SpoAB.
 
  
 0.986
CUN89453.1
Stage III sporulation protein AC.
 
  
 0.984
CUN89312.1
Stage III sporulation protein AG.
 
  
 0.982
CUN89519.1
Uncharacterized protein conserved in bacteria.
 
  
 0.972
CUN89350.1
Stage III sporulation protein AF.
  
  
 0.971
CUN89275.1
SpoIIIAH-like protein.
 
  
 0.969
spoIIID
14 kDa transcription factor.
  
    0.953
CUN90035.1
Stage II sporulation protein P.
  
   
 0.835
spoIVA
Stage IV sporulation protein A.
  
  
 0.831
Your Current Organism:
Faecalicatena contorta
NCBI taxonomy Id: 39482
Other names: ATCC 25540, CCUG 52236, Catenabacterium contortum, DSM 3982, Eubacterium contortum, F. contorta, JCM 6483
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.