STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUN96344.1O-Methyltransferase involved in polyketide biosynthesis. (268 aa)    
Predicted Functional Partners:
CUN96376.1
Putative multidrug export ATP-binding/permease protein SAV1866.
 
     0.810
irtA_2
Iron import ATP-binding/permease protein IrtA.
 
     0.804
CUN96443.1
DNA-binding transcriptional repressor AcrR.
 
     0.738
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
     
 0.707
irtA_3
Iron import ATP-binding/permease protein IrtA.
 
     0.562
CUO35401.1
Putative multidrug export ATP-binding/permease protein SAV1866.
 
     0.560
msbA_3
Lipid A export ATP-binding/permease protein MsbA.
 
     0.555
bepR
HTH-type transcriptional repressor BepR.
  
     0.545
bmrA
Multidrug resistance ABC transporter ATP-binding/permease protein BmrA.
 
     0.511
CUO17163.1
Putative multidrug export ATP-binding/permease protein SAV1866.
 
     0.511
Your Current Organism:
Faecalicatena contorta
NCBI taxonomy Id: 39482
Other names: ATCC 25540, CCUG 52236, Catenabacterium contortum, DSM 3982, Eubacterium contortum, F. contorta, JCM 6483
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