STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cynR_2Cyn operon transcriptional activator; Belongs to the LysR transcriptional regulatory family. (292 aa)    
Predicted Functional Partners:
benM
Ben and cat operon transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.775
catM_2
Cat operon transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.775
hcaR_2
Hca operon transcriptional activator; Belongs to the LysR transcriptional regulatory family.
  
     0.774
cynR_3
Cyn operon transcriptional activator; Belongs to the LysR transcriptional regulatory family.
  
     0.774
cmpR_1
HTH-type transcriptional activator CmpR; Belongs to the LysR transcriptional regulatory family.
  
     0.772
cynR_1
Cyn operon transcriptional activator; Belongs to the LysR transcriptional regulatory family.
  
     0.764
cysL_3
CysJI operon transcriptional activator; Belongs to the LysR transcriptional regulatory family.
  
     0.742
cysL_2
CysJI operon transcriptional activator; Belongs to the LysR transcriptional regulatory family.
  
     0.738
hcaR_1
Hca operon transcriptional activator; Belongs to the LysR transcriptional regulatory family.
  
     0.695
cbl
HTH-type transcriptional regulator cbl; Belongs to the LysR transcriptional regulatory family.
  
     0.588
Your Current Organism:
Faecalicatena contorta
NCBI taxonomy Id: 39482
Other names: ATCC 25540, CCUG 52236, Catenabacterium contortum, DSM 3982, Eubacterium contortum, F. contorta, JCM 6483
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.