CUO05844.1 protein (Faecalicatena contorta) - STRING interaction network

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Known Interactions

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Predicted Interactions

gene neighborhood

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Score

CUO05844.1

Conjugal transfer coupling protein TraG. (515 aa)

Predicted Functional Partners:

CUO05818.1

0.926

CUO06408.1

0.884

CUO05681.1

0.829

CUO97004.1

0.792

CUO07348.1

0.789

CUP41355.1

0.788

CUP41553.1

0.788

CUN66928.1

0.787

CUO08503.1

0.757

CUN96841.1

0.742

Your Current Organism:

Faecalicatena contorta

NCBI taxonomy Id: 39482
Other names: ATCC 25540, CCUG 52236, Catenabacterium contortum, DSM 3982, Eubacterium contortum, F. contorta, JCM 6483

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUN66928.1	CUO05818.1	ERS852491_00208	ERS852491_01162	Type IV secretory pathway%2C VirB4 components.	Protein of uncharacterised function (DUF3801).	0.469
CUN66928.1	CUO05844.1	ERS852491_00208	ERS852491_01163	Type IV secretory pathway%2C VirB4 components.	Conjugal transfer coupling protein TraG.	0.787
CUN66928.1	CUO06408.1	ERS852491_00208	ERS852491_01182	Type IV secretory pathway%2C VirB4 components.	Uncharacterised protein.	0.727
CUN66928.1	CUO08503.1	ERS852491_00208	ERS852491_01247	Type IV secretory pathway%2C VirB4 components.	Uncharacterised protein.	0.786
CUN96841.1	CUO05844.1	ERS852491_00941	ERS852491_01163	Type IV secretory pathway%2C VirB4 components.	Conjugal transfer coupling protein TraG.	0.742
CUO05681.1	CUO05818.1	ERS852491_01160	ERS852491_01162	Uncharacterised protein.	Protein of uncharacterised function (DUF3801).	0.903
CUO05681.1	CUO05844.1	ERS852491_01160	ERS852491_01163	Uncharacterised protein.	Conjugal transfer coupling protein TraG.	0.829
CUO05681.1	CUO06408.1	ERS852491_01160	ERS852491_01182	Uncharacterised protein.	Uncharacterised protein.	0.713
CUO05818.1	CUN66928.1	ERS852491_01162	ERS852491_00208	Protein of uncharacterised function (DUF3801).	Type IV secretory pathway%2C VirB4 components.	0.469
CUO05818.1	CUO05681.1	ERS852491_01162	ERS852491_01160	Protein of uncharacterised function (DUF3801).	Uncharacterised protein.	0.903
CUO05818.1	CUO05844.1	ERS852491_01162	ERS852491_01163	Protein of uncharacterised function (DUF3801).	Conjugal transfer coupling protein TraG.	0.926
CUO05818.1	CUO06408.1	ERS852491_01162	ERS852491_01182	Protein of uncharacterised function (DUF3801).	Uncharacterised protein.	0.773
CUO05818.1	CUO08503.1	ERS852491_01162	ERS852491_01247	Protein of uncharacterised function (DUF3801).	Uncharacterised protein.	0.760
CUO05818.1	CUO97004.1	ERS852491_01162	ERS852491_03868	Protein of uncharacterised function (DUF3801).	Type IV secretory pathway%2C VirB4 components.	0.535
CUO05844.1	CUN66928.1	ERS852491_01163	ERS852491_00208	Conjugal transfer coupling protein TraG.	Type IV secretory pathway%2C VirB4 components.	0.787
CUO05844.1	CUN96841.1	ERS852491_01163	ERS852491_00941	Conjugal transfer coupling protein TraG.	Type IV secretory pathway%2C VirB4 components.	0.742
CUO05844.1	CUO05681.1	ERS852491_01163	ERS852491_01160	Conjugal transfer coupling protein TraG.	Uncharacterised protein.	0.829
CUO05844.1	CUO05818.1	ERS852491_01163	ERS852491_01162	Conjugal transfer coupling protein TraG.	Protein of uncharacterised function (DUF3801).	0.926
CUO05844.1	CUO06408.1	ERS852491_01163	ERS852491_01182	Conjugal transfer coupling protein TraG.	Uncharacterised protein.	0.884
CUO05844.1	CUO07348.1	ERS852491_01163	ERS852491_01212	Conjugal transfer coupling protein TraG.	Type IV secretory pathway%2C VirB4 components.	0.789

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Network Stats

number of nodes:

11

number of edges:

28

average node degree:

5.09

avg. local clustering coefficient:

0.847

expected number of edges:

12

PPI enrichment p-value:

7.35e-05

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0051205

Protein insertion into membrane

6 of 8

2.21

3.94

5.90e-09

GO:0071709

Membrane assembly

6 of 12

2.04

3.5

1.81e-08

GO:0043163

Cell envelope organization

6 of 12

2.04

3.5

1.81e-08

GO:0043165

Gram-negative-bacterium-type cell outer membrane assembly

5 of 11

1.99

2.95

3.77e-07

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0009279

Cell outer membrane

6 of 55

1.37

1.64

1.16e-05

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:1388

Protein insertion into membrane

5 of 5

2.34

3.55

9.24e-08

CL:3083

Mixed, incl. AsmA-like, C-terminal, and STAS domain

3 of 6

2.04

1.66

0.00054

CL:3047

Mostly uncharacterized, incl. AsmA-like, C-terminal, and Peptidoglycan binding

4 of 40

1.34

1.08

0.0019

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0009279

Cell outer membrane

6 of 40

1.51

1.96

3.83e-06

GOCC:0071944

Cell periphery

7 of 347

0.64

0.45

0.0099

GOCC:0016020

Membrane

8 of 434

0.6

0.44

0.0051

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0998

Cell outer membrane

4 of 30

1.46

1.14

0.0022

KW-0449

Lipoprotein

3 of 18

1.56

0.95

0.0098

KW-0732

Signal

5 of 164

0.82

0.47

0.0381

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