STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO11701.1Bacteriophage peptidoglycan hydrolase. (331 aa)    
Predicted Functional Partners:
cwlC
Sporulation-specific N-acetylmuramoyl-L-alanine amidase.
    
 0.809
CUO11671.1
Phage minor structural protein%2C N-terminal region.
       0.783
yqbO_1
Phage-related minor tail protein.
  
    0.770
CUO11640.1
Uncharacterised protein.
       0.757
CUO11730.1
Uncharacterised protein.
       0.755
CUO11762.1
Collagen triple helix repeat (20 copies).
    
  0.742
CUO11554.1
Uncharacterised protein.
       0.716
CUO11579.1
Bacteriophage Gp15 protein.
       0.716
CUO11792.1
Uncharacterised protein.
       0.692
CUO11527.1
Uncharacterised protein.
       0.600
Your Current Organism:
Faecalicatena contorta
NCBI taxonomy Id: 39482
Other names: ATCC 25540, CCUG 52236, Catenabacterium contortum, DSM 3982, Eubacterium contortum, F. contorta, JCM 6483
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.