STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO13364.1Phage portal protein%2C HK97 family. (427 aa)    
Predicted Functional Partners:
CUO13417.1
Predicted phage phi-C31 gp36 major capsid-like protein.
 
 
 
 0.973
clpP1
ATP-dependent Clp protease proteolytic subunit 1; Belongs to the peptidase S14 family.
 
  
 0.965
CUO13354.1
Phage terminase-like protein%2C large subunit.
 
   
 0.964
CUO13325.1
Phage terminase%2C small subunit.
 
  
 0.958
CUO13530.1
Phage major tail protein%2C phi13 family.
 
   
 0.900
CUO54748.1
Predicted outer membrane protein.
   
   0.790
CUP44136.1
Phage-related holin (Lysis protein).
 
   
 0.782
CUN91272.1
Uncharacterised protein.
  
   0.775
CUO80335.1
Uncharacterised protein.
  
   0.775
pehA
Endo-polygalacturonase precursor; Belongs to the glycosyl hydrolase 28 family.
  
   0.775
Your Current Organism:
Faecalicatena contorta
NCBI taxonomy Id: 39482
Other names: ATCC 25540, CCUG 52236, Catenabacterium contortum, DSM 3982, Eubacterium contortum, F. contorta, JCM 6483
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