STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO17325.1Saccharopine dehydrogenase. (361 aa)    
Predicted Functional Partners:
mbtB_1
Phenyloxazoline synthase MbtB; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
 0.965
mbtB_4
Phenyloxazoline synthase MbtB.
 
 
 0.912
mbtB_3
Phenyloxazoline synthase MbtB.
 
 
 0.858
mbtB_5
Phenyloxazoline synthase MbtB.
 
 
 0.848
ppsD
Plipastatin synthase subunit D.
 
 
 0.842
mbtB_2
Phenyloxazoline synthase MbtB.
 
 
 0.829
sfp_3
4'-phosphopantetheinyl transferase sfp; Belongs to the P-Pant transferase superfamily.
 
  
 0.727
sfp_2
4'-phosphopantetheinyl transferase sfp; Belongs to the P-Pant transferase superfamily.
 
  
 0.724
srfAA
Surfactin synthase subunit 1; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
 0.702
dhbE_1
2%2C3-dihydroxybenzoate-AMP ligase.
 
   
 0.677
Your Current Organism:
Faecalicatena contorta
NCBI taxonomy Id: 39482
Other names: ATCC 25540, CCUG 52236, Catenabacterium contortum, DSM 3982, Eubacterium contortum, F. contorta, JCM 6483
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