Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
accD | mbtB_1 | ERS852491_00036 | ERS852491_01482 | Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | Phenyloxazoline synthase MbtB; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.897 |
accD | mbtB_4 | ERS852491_00036 | ERS852491_01971 | Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | Phenyloxazoline synthase MbtB. | 0.932 |
accD | ppsD | ERS852491_00036 | ERS852491_01972 | Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | Plipastatin synthase subunit D. | 0.940 |
accD | sfp_2 | ERS852491_00036 | ERS852491_01488 | Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | 4'-phosphopantetheinyl transferase sfp; Belongs to the P-Pant transferase superfamily. | 0.964 |
dhbE_1 | lgrE_1 | ERS852491_01487 | ERS852491_01489 | 2%2C3-dihydroxybenzoate-AMP ligase. | Linear gramicidin dehydrogenase LgrE. | 0.992 |
dhbE_1 | mbtB_1 | ERS852491_01487 | ERS852491_01482 | 2%2C3-dihydroxybenzoate-AMP ligase. | Phenyloxazoline synthase MbtB; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.999 |
dhbE_1 | mbtB_2 | ERS852491_01487 | ERS852491_01484 | 2%2C3-dihydroxybenzoate-AMP ligase. | Phenyloxazoline synthase MbtB. | 0.994 |
dhbE_1 | mbtB_3 | ERS852491_01487 | ERS852491_01486 | 2%2C3-dihydroxybenzoate-AMP ligase. | Phenyloxazoline synthase MbtB. | 0.999 |
dhbE_1 | mbtB_4 | ERS852491_01487 | ERS852491_01971 | 2%2C3-dihydroxybenzoate-AMP ligase. | Phenyloxazoline synthase MbtB. | 0.999 |
dhbE_1 | mbtB_5 | ERS852491_01487 | ERS852491_01974 | 2%2C3-dihydroxybenzoate-AMP ligase. | Phenyloxazoline synthase MbtB. | 0.999 |
dhbE_1 | ppsD | ERS852491_01487 | ERS852491_01972 | 2%2C3-dihydroxybenzoate-AMP ligase. | Plipastatin synthase subunit D. | 0.999 |
dhbE_1 | sfp_2 | ERS852491_01487 | ERS852491_01488 | 2%2C3-dihydroxybenzoate-AMP ligase. | 4'-phosphopantetheinyl transferase sfp; Belongs to the P-Pant transferase superfamily. | 0.915 |
dhbE_1 | srfAA | ERS852491_01487 | ERS852491_00784 | 2%2C3-dihydroxybenzoate-AMP ligase. | Surfactin synthase subunit 1; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.999 |
lgrE_1 | dhbE_1 | ERS852491_01489 | ERS852491_01487 | Linear gramicidin dehydrogenase LgrE. | 2%2C3-dihydroxybenzoate-AMP ligase. | 0.992 |
lgrE_1 | mbtB_1 | ERS852491_01489 | ERS852491_01482 | Linear gramicidin dehydrogenase LgrE. | Phenyloxazoline synthase MbtB; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.989 |
lgrE_1 | mbtB_2 | ERS852491_01489 | ERS852491_01484 | Linear gramicidin dehydrogenase LgrE. | Phenyloxazoline synthase MbtB. | 0.918 |
lgrE_1 | mbtB_3 | ERS852491_01489 | ERS852491_01486 | Linear gramicidin dehydrogenase LgrE. | Phenyloxazoline synthase MbtB. | 0.988 |
lgrE_1 | mbtB_4 | ERS852491_01489 | ERS852491_01971 | Linear gramicidin dehydrogenase LgrE. | Phenyloxazoline synthase MbtB. | 0.993 |
lgrE_1 | mbtB_5 | ERS852491_01489 | ERS852491_01974 | Linear gramicidin dehydrogenase LgrE. | Phenyloxazoline synthase MbtB. | 0.956 |
lgrE_1 | ppsD | ERS852491_01489 | ERS852491_01972 | Linear gramicidin dehydrogenase LgrE. | Plipastatin synthase subunit D. | 0.999 |
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