STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssnAPutative chlorohydrolase/aminohydrolase. (443 aa)    
Predicted Functional Partners:
gltD_2
Glutamate synthase [NADPH] small chain.
 
 
  0.974
mop
Aldehyde oxidoreductase.
 
 
 0.967
ndhF
Nicotinate dehydrogenase FAD-subunit.
 
 
  0.887
hcrA_1
4-hydroxybenzoyl-CoA reductase subunit alpha.
 
 
 0.840
dapE_1
Probable succinyl-diaminopimelate desuccinylase.
 
    0.832
ygeW
Aspartate/ornithine carbamoyltransferase family protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
 
    0.821
punA
Purine nucleoside phosphorylase 1; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
 
 
 0.799
rihA
Pyrimidine-specific ribonucleoside hydrolase rihA.
  
 
 0.793
hpt
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
    
 0.793
speE
Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine; Belongs to the spermidine/spermine synthase family.
   
  0.791
Your Current Organism:
Faecalicatena contorta
NCBI taxonomy Id: 39482
Other names: ATCC 25540, CCUG 52236, Catenabacterium contortum, DSM 3982, Eubacterium contortum, F. contorta, JCM 6483
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.