STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO27948.1FtsX-like permease family. (675 aa)    
Predicted Functional Partners:
macB_4
Macrolide export ATP-binding/permease protein MacB.
 
 0.981
graS_1
Sensor histidine kinase graS.
 
   
 0.879
lolD_7
Lipoprotein-releasing system ATP-binding protein LolD.
 
 0.877
macB_14
Macrolide export ATP-binding/permease protein MacB.
 
 0.817
macB_9
Macrolide export ATP-binding/permease protein MacB.
 
 0.800
CUO86954.1
FtsX-like permease family.
  
  
  0.795
lolD_9
Lipoprotein-releasing system ATP-binding protein LolD.
 
 0.756
graR_1
Glycopeptide resistance-associated protein R.
 
     0.727
CUO72331.1
Efflux transporter%2C RND family%2C MFP subunit.
  
  
 0.698
CUO54921.1
Conjugative transposon protein TcpC.
  
 0.680
Your Current Organism:
Faecalicatena contorta
NCBI taxonomy Id: 39482
Other names: ATCC 25540, CCUG 52236, Catenabacterium contortum, DSM 3982, Eubacterium contortum, F. contorta, JCM 6483
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.