Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUO43279.1 | ykfC | ERS852491_02191 | ERS852491_01787 | Uncharacterised protein. | Gamma-D-glutamyl-L-lysine endopeptidase. | 0.421 |
CUP00858.1 | CUP00885.1 | ERS852491_03997 | ERS852491_03998 | Uncharacterised protein. | Uncharacterised protein. | 0.830 |
CUP00858.1 | ykfC | ERS852491_03997 | ERS852491_01787 | Uncharacterised protein. | Gamma-D-glutamyl-L-lysine endopeptidase. | 0.599 |
CUP00885.1 | CUP00858.1 | ERS852491_03998 | ERS852491_03997 | Uncharacterised protein. | Uncharacterised protein. | 0.830 |
CUP00885.1 | ykfC | ERS852491_03998 | ERS852491_01787 | Uncharacterised protein. | Gamma-D-glutamyl-L-lysine endopeptidase. | 0.550 |
CUP43144.1 | dpiB_1 | ERS852491_05133 | ERS852491_01493 | Phage-related holin (Lysis protein). | Sensor histidine kinase DpiB. | 0.589 |
CUP43144.1 | dpiB_2 | ERS852491_05133 | ERS852491_01980 | Phage-related holin (Lysis protein). | Sensor histidine kinase DpiB. | 0.632 |
CUP43144.1 | ykfC | ERS852491_05133 | ERS852491_01787 | Phage-related holin (Lysis protein). | Gamma-D-glutamyl-L-lysine endopeptidase. | 0.400 |
dpiB_1 | CUP43144.1 | ERS852491_01493 | ERS852491_05133 | Sensor histidine kinase DpiB. | Phage-related holin (Lysis protein). | 0.589 |
dpiB_1 | ykfC | ERS852491_01493 | ERS852491_01787 | Sensor histidine kinase DpiB. | Gamma-D-glutamyl-L-lysine endopeptidase. | 0.480 |
dpiB_2 | CUP43144.1 | ERS852491_01980 | ERS852491_05133 | Sensor histidine kinase DpiB. | Phage-related holin (Lysis protein). | 0.632 |
dpiB_2 | ykfC | ERS852491_01980 | ERS852491_01787 | Sensor histidine kinase DpiB. | Gamma-D-glutamyl-L-lysine endopeptidase. | 0.596 |
ripB | ykfC | ERS852491_01893 | ERS852491_01787 | Peptidoglycan endopeptidase RipB precursor. | Gamma-D-glutamyl-L-lysine endopeptidase. | 0.426 |
ykfC | CUO43279.1 | ERS852491_01787 | ERS852491_02191 | Gamma-D-glutamyl-L-lysine endopeptidase. | Uncharacterised protein. | 0.421 |
ykfC | CUP00858.1 | ERS852491_01787 | ERS852491_03997 | Gamma-D-glutamyl-L-lysine endopeptidase. | Uncharacterised protein. | 0.599 |
ykfC | CUP00885.1 | ERS852491_01787 | ERS852491_03998 | Gamma-D-glutamyl-L-lysine endopeptidase. | Uncharacterised protein. | 0.550 |
ykfC | CUP43144.1 | ERS852491_01787 | ERS852491_05133 | Gamma-D-glutamyl-L-lysine endopeptidase. | Phage-related holin (Lysis protein). | 0.400 |
ykfC | dpiB_1 | ERS852491_01787 | ERS852491_01493 | Gamma-D-glutamyl-L-lysine endopeptidase. | Sensor histidine kinase DpiB. | 0.480 |
ykfC | dpiB_2 | ERS852491_01787 | ERS852491_01980 | Gamma-D-glutamyl-L-lysine endopeptidase. | Sensor histidine kinase DpiB. | 0.596 |
ykfC | ripB | ERS852491_01787 | ERS852491_01893 | Gamma-D-glutamyl-L-lysine endopeptidase. | Peptidoglycan endopeptidase RipB precursor. | 0.426 |