STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sufSCysteine desulfurase. (370 aa)    
Predicted Functional Partners:
nifU
NifU-like protein.
  
 0.986
CUN91114.1
FeS cluster assembly scaffold protein NifU.
  
 0.977
CUO57697.1
Uncharacterized protein conserved in bacteria.
    
   0.915
sufB
FeS cluster assembly protein sufB.
  
 
 0.842
trxB_1
Thioredoxin reductase.
 
 
  0.840
trxB_3
Thioredoxin reductase.
 
 
  0.833
selD
Selenide%2C water dikinase; Synthesizes selenophosphate from selenide and ATP.
    
 0.832
cysA_1
Sulfate/thiosulfate import ATP-binding protein CysA.
  
  
 0.820
dapE_2
Probable succinyl-diaminopimelate desuccinylase.
 
     0.816
metB
Cystathionine gamma-synthase.
     
 0.813
Your Current Organism:
Faecalicatena contorta
NCBI taxonomy Id: 39482
Other names: ATCC 25540, CCUG 52236, Catenabacterium contortum, DSM 3982, Eubacterium contortum, F. contorta, JCM 6483
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.