STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lolD_4Lipoprotein-releasing system ATP-binding protein LolD. (228 aa)    
Predicted Functional Partners:
CUO94450.1
Acidobacterial duplicated orphan permease.
 
 0.987
CUO39645.1
FtsX-like permease family.
 
 0.984
CUN68563.1
FtsX-like permease family.
  
 0.982
CUO55984.1
Acidobacterial duplicated orphan permease.
  
 0.979
macB_7
Macrolide export ATP-binding/permease protein MacB.
  0.976
macB_2
Macrolide export ATP-binding/permease protein MacB.
  0.973
CUO40475.1
Acidobacterial duplicated orphan permease.
 
  0.973
gsiA_4
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
 
    
0.906
bmrA
Multidrug resistance ABC transporter ATP-binding/permease protein BmrA.
 
     
0.894
CUO80308.1
Putative multidrug export ATP-binding/permease protein SAV1866.
 
     
0.883
Your Current Organism:
Faecalicatena contorta
NCBI taxonomy Id: 39482
Other names: ATCC 25540, CCUG 52236, Catenabacterium contortum, DSM 3982, Eubacterium contortum, F. contorta, JCM 6483
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.