STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO46506.1ABC-type uncharacterized transport system%2C permease component; Belongs to the binding-protein-dependent transport system permease family. (314 aa)    
Predicted Functional Partners:
rbsA_5
Ribose import ATP-binding protein RbsA.
 
 0.995
CUO46530.1
Beta-methylgalactoside transporter inner membrane component; Belongs to the binding-protein-dependent transport system permease family.
 
0.987
mglA_1
Galactose/methyl galactoside import ATP-binding protein MglA.
 
 0.978
xylG_1
Xylose import ATP-binding protein XylG.
 
 0.978
tmpC
Purine nucleoside receptor A.
 
 
 0.963
CUO34603.1
Purine-binding protein BAB2_0673 precursor.
 
 
 0.961
CUO46626.1
Purine-binding protein BAB2_0673 precursor.
 
 
 0.959
CUN63557.1
Ribose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.954
CUO34541.1
L-arabinose transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.948
tkt
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
       0.773
Your Current Organism:
Faecalicatena contorta
NCBI taxonomy Id: 39482
Other names: ATCC 25540, CCUG 52236, Catenabacterium contortum, DSM 3982, Eubacterium contortum, F. contorta, JCM 6483
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