Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUO54996.1 | CUO55054.1 | ERS852491_02554 | ERS852491_02556 | Type IV secretory pathway%2C VirB4 components. | Antirestriction protein. | 0.937 |
CUO54996.1 | CUO55077.1 | ERS852491_02554 | ERS852491_02557 | Type IV secretory pathway%2C VirB4 components. | Antirestriction protein. | 0.935 |
CUO54996.1 | CUO55121.1 | ERS852491_02554 | ERS852491_02559 | Type IV secretory pathway%2C VirB4 components. | Uncharacterised protein. | 0.857 |
CUO54996.1 | CUO55170.1 | ERS852491_02554 | ERS852491_02561 | Type IV secretory pathway%2C VirB4 components. | Replication initiation factor. | 0.914 |
CUO54996.1 | CUO60447.1 | ERS852491_02554 | ERS852491_02720 | Type IV secretory pathway%2C VirB4 components. | Replication initiation factor. | 0.820 |
CUO54996.1 | CUP05649.1 | ERS852491_02554 | ERS852491_04136 | Type IV secretory pathway%2C VirB4 components. | Replication initiation factor. | 0.892 |
CUO54996.1 | CUP05715.1 | ERS852491_02554 | ERS852491_04139 | Type IV secretory pathway%2C VirB4 components. | Bacterial protein of uncharacterised function (DUF961). | 0.854 |
CUO54996.1 | CUP12753.1 | ERS852491_02554 | ERS852491_04338 | Type IV secretory pathway%2C VirB4 components. | Bacterial protein of uncharacterised function (DUF961). | 0.855 |
CUO54996.1 | ftsK | ERS852491_02554 | ERS852491_02562 | Type IV secretory pathway%2C VirB4 components. | DNA translocase FtsK. | 0.866 |
CUO54996.1 | iap_2 | ERS852491_02554 | ERS852491_02552 | Type IV secretory pathway%2C VirB4 components. | Probable endopeptidase p60 precursor. | 0.973 |
CUO55054.1 | CUO54996.1 | ERS852491_02556 | ERS852491_02554 | Antirestriction protein. | Type IV secretory pathway%2C VirB4 components. | 0.937 |
CUO55054.1 | CUO55077.1 | ERS852491_02556 | ERS852491_02557 | Antirestriction protein. | Antirestriction protein. | 0.782 |
CUO55054.1 | CUO55121.1 | ERS852491_02556 | ERS852491_02559 | Antirestriction protein. | Uncharacterised protein. | 0.868 |
CUO55054.1 | CUO55170.1 | ERS852491_02556 | ERS852491_02561 | Antirestriction protein. | Replication initiation factor. | 0.863 |
CUO55054.1 | CUO60447.1 | ERS852491_02556 | ERS852491_02720 | Antirestriction protein. | Replication initiation factor. | 0.818 |
CUO55054.1 | CUP05649.1 | ERS852491_02556 | ERS852491_04136 | Antirestriction protein. | Replication initiation factor. | 0.809 |
CUO55054.1 | CUP05715.1 | ERS852491_02556 | ERS852491_04139 | Antirestriction protein. | Bacterial protein of uncharacterised function (DUF961). | 0.793 |
CUO55054.1 | CUP12753.1 | ERS852491_02556 | ERS852491_04338 | Antirestriction protein. | Bacterial protein of uncharacterised function (DUF961). | 0.794 |
CUO55054.1 | ftsK | ERS852491_02556 | ERS852491_02562 | Antirestriction protein. | DNA translocase FtsK. | 0.840 |
CUO55054.1 | iap_2 | ERS852491_02556 | ERS852491_02552 | Antirestriction protein. | Probable endopeptidase p60 precursor. | 0.885 |
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