STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adhE_3Aldehyde-alcohol dehydrogenase. (393 aa)    
Predicted Functional Partners:
sucD_2
Succinate-semialdehyde dehydrogenase (acetylating).
 0.994
sucD_1
Succinate-semialdehyde dehydrogenase (acetylating).
 0.990
porA
Pyruvate synthase subunit porA.
  
 
 0.962
pduE
Propanediol dehydratase small subunit.
    
  0.802
nqo1_2
NADH-quinone oxidoreductase subunit 1.
  
 
 0.772
dhaB
Glycerol dehydratase large subunit.
    
 0.771
xylB_2
Aryl-alcohol dehydrogenase.
   
 0.769
accD
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
     
 0.768
pduD
Propanediol dehydratase medium subunit.
  
 
 0.767
aldA
Putative aldehyde dehydrogenase AldA; Belongs to the aldehyde dehydrogenase family.
 
 0.759
Your Current Organism:
Faecalicatena contorta
NCBI taxonomy Id: 39482
Other names: ATCC 25540, CCUG 52236, Catenabacterium contortum, DSM 3982, Eubacterium contortum, F. contorta, JCM 6483
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