STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsC_13Ribose transport system permease protein rbsC; Belongs to the binding-protein-dependent transport system permease family. (313 aa)    
Predicted Functional Partners:
rbsB_6
D-ribose-binding periplasmic protein precursor.
  0.985
rbsB_8
D-ribose-binding periplasmic protein precursor.
 
  0.954
araG_2
Arabinose import ATP-binding protein AraG.
  0.950
rbsB_5
D-ribose-binding periplasmic protein precursor.
 
  0.919
rbsB_1
D-ribose-binding periplasmic protein precursor.
 
  0.917
rbsB_7
D-ribose-binding periplasmic protein precursor.
 
  0.914
rbsB_9
D-ribose-binding periplasmic protein precursor.
 
  0.874
alsB_4
D-allose-binding periplasmic protein precursor.
 
  0.867
rbsB_3
D-ribose-binding periplasmic protein precursor.
 
  0.866
ytfQ_2
ABC transporter periplasmic-binding protein ytfQ precursor.
  
  0.836
Your Current Organism:
Faecalicatena contorta
NCBI taxonomy Id: 39482
Other names: ATCC 25540, CCUG 52236, Catenabacterium contortum, DSM 3982, Eubacterium contortum, F. contorta, JCM 6483
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.