STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alkTRubredoxin-NAD(+) reductase. (408 aa)    
Predicted Functional Partners:
cooS1
Carbon monoxide dehydrogenase 1.
 
 
 0.991
cooF
Iron-sulfur protein.
  
 0.988
rd
Rubredoxin.
  
 0.982
npr
NADH peroxidase.
  
 0.975
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
  
 
 0.965
CUO49665.1
Iron hydrogenase 1.
  
 0.961
hrb
Nitric oxide reductase NADH:FprA oxidoreductase.
  
 0.951
porA
Pyruvate synthase subunit porA.
  
 
 0.939
CUO27140.1
NADH oxidase.
 
  
 0.860
glnA_3
Glutamine synthetase.
  
 
 0.853
Your Current Organism:
Faecalicatena contorta
NCBI taxonomy Id: 39482
Other names: ATCC 25540, CCUG 52236, Catenabacterium contortum, DSM 3982, Eubacterium contortum, F. contorta, JCM 6483
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.