Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CUN91114.1 | iscS | ERS852491_00803 | ERS852491_01845 | FeS cluster assembly scaffold protein NifU. | Cysteine desulfurase. | 0.999 |
| CUN91114.1 | nifS | ERS852491_00803 | ERS852491_04293 | FeS cluster assembly scaffold protein NifU. | Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily. | 0.999 |
| CUN91114.1 | nsrR | ERS852491_00803 | ERS852491_02935 | FeS cluster assembly scaffold protein NifU. | HTH-type transcriptional repressor NsrR. | 0.475 |
| CUO96932.1 | nsrR | ERS852491_03865 | ERS852491_02935 | Putative transposase. | HTH-type transcriptional repressor NsrR. | 0.449 |
| alkT | cooF | ERS852491_02932 | ERS852491_02933 | Rubredoxin-NAD(+) reductase. | Iron-sulfur protein. | 0.988 |
| alkT | cooS1 | ERS852491_02932 | ERS852491_02934 | Rubredoxin-NAD(+) reductase. | Carbon monoxide dehydrogenase 1. | 0.991 |
| alkT | nsrR | ERS852491_02932 | ERS852491_02935 | Rubredoxin-NAD(+) reductase. | HTH-type transcriptional repressor NsrR. | 0.584 |
| cooF | alkT | ERS852491_02933 | ERS852491_02932 | Iron-sulfur protein. | Rubredoxin-NAD(+) reductase. | 0.988 |
| cooF | cooS1 | ERS852491_02933 | ERS852491_02934 | Iron-sulfur protein. | Carbon monoxide dehydrogenase 1. | 0.991 |
| cooF | nsrR | ERS852491_02933 | ERS852491_02935 | Iron-sulfur protein. | HTH-type transcriptional repressor NsrR. | 0.571 |
| cooS1 | alkT | ERS852491_02934 | ERS852491_02932 | Carbon monoxide dehydrogenase 1. | Rubredoxin-NAD(+) reductase. | 0.991 |
| cooS1 | cooF | ERS852491_02934 | ERS852491_02933 | Carbon monoxide dehydrogenase 1. | Iron-sulfur protein. | 0.991 |
| cooS1 | nsrR | ERS852491_02934 | ERS852491_02935 | Carbon monoxide dehydrogenase 1. | HTH-type transcriptional repressor NsrR. | 0.604 |
| iscS | CUN91114.1 | ERS852491_01845 | ERS852491_00803 | Cysteine desulfurase. | FeS cluster assembly scaffold protein NifU. | 0.999 |
| iscS | nifS | ERS852491_01845 | ERS852491_04293 | Cysteine desulfurase. | Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily. | 0.883 |
| iscS | nifU | ERS852491_01845 | ERS852491_04294 | Cysteine desulfurase. | NifU-like protein. | 0.999 |
| iscS | nsrR | ERS852491_01845 | ERS852491_02935 | Cysteine desulfurase. | HTH-type transcriptional repressor NsrR. | 0.798 |
| nifS | CUN91114.1 | ERS852491_04293 | ERS852491_00803 | Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily. | FeS cluster assembly scaffold protein NifU. | 0.999 |
| nifS | iscS | ERS852491_04293 | ERS852491_01845 | Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily. | Cysteine desulfurase. | 0.883 |
| nifS | nifU | ERS852491_04293 | ERS852491_04294 | Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily. | NifU-like protein. | 0.999 |
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