STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yesO_3Putative ABC transporter substrate-binding protein yesO. (446 aa)    
Predicted Functional Partners:
ugpC
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.
  
 0.888
ycjP_34
Inner membrane ABC transporter permease protein ycjP.
   
  0.826
ycjP_3
Inner membrane ABC transporter permease protein ycjP.
  
  0.818
ycjP_27
Inner membrane ABC transporter permease protein ycjP.
  
  0.760
ycjP_11
Inner membrane ABC transporter permease protein ycjP.
  
  0.757
CUO58272.1
Glycerol-3-phosphate transporter membrane protein.
  
  0.742
ycjP_30
Inner membrane ABC transporter permease protein ycjP.
  
  0.742
ycjP_35
Inner membrane ABC transporter permease protein ycjP.
  
  0.742
ugpA_22
Sn-glycerol-3-phosphate transport system permease protein ugpA.
 
   0.740
ycjP_5
Inner membrane ABC transporter permease protein ycjP.
  
  0.721
Your Current Organism:
Faecalicatena contorta
NCBI taxonomy Id: 39482
Other names: ATCC 25540, CCUG 52236, Catenabacterium contortum, DSM 3982, Eubacterium contortum, F. contorta, JCM 6483
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.