STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO75155.1Uncharacterised protein. (170 aa)    
Predicted Functional Partners:
CUO75174.1
Radical SAM protein.
       0.837
ssb_1
Helix-destabilizing protein.
 
     0.817
maeB_1
NADP-dependent malic enzyme.
       0.789
dnaD
DNA replication protein dnaD.
  
     0.770
dnaI_3
Primosomal protein DnaI; Belongs to the DnaA family.
  
     0.714
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.681
CUP16464.1
Uncharacterized protein conserved in bacteria.
  
     0.645
dnaX_1
DNA polymerase III subunit tau.
  
    0.600
CUO84130.1
HlyD family secretion protein.
  
     0.557
CUN80322.1
Small%2C acid-soluble spore proteins%2C alpha/beta type.
  
     0.525
Your Current Organism:
Faecalicatena contorta
NCBI taxonomy Id: 39482
Other names: ATCC 25540, CCUG 52236, Catenabacterium contortum, DSM 3982, Eubacterium contortum, F. contorta, JCM 6483
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