STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO78814.1Phosphoribosylaminoimidazole carboxylase%2C catalytic subunit. (248 aa)    
Predicted Functional Partners:
CUO78756.1
ATP-utilizing enzymes of the PP-loop superfamily.
  
 0.996
larC
Protein of uncharacterised function DUF111; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family.
 
  
 0.989
CUN99757.1
Domain of uncharacterised function (DUF2088).
 
  
 0.932
CUO46281.1
Domain of uncharacterised function (DUF2088).
 
  
 0.932
CUO21825.1
Domain of uncharacterised function (DUF2088).
 
  
 0.931
cbiM
Energy-coupling factor transporter probable substrate-capture protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
  
    0.800
CUO78834.1
Uncharacterized ABC transporter ATP-binding protein HI_1252.
       0.752
CUO78729.1
Uncharacterised protein.
       0.445
ycdT_1
Probable diguanylate cyclase YcdT.
 
      0.442
Your Current Organism:
Faecalicatena contorta
NCBI taxonomy Id: 39482
Other names: ATCC 25540, CCUG 52236, Catenabacterium contortum, DSM 3982, Eubacterium contortum, F. contorta, JCM 6483
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