STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prpC2-methylcitrate synthase; Belongs to the citrate synthase family. (459 aa)    
Predicted Functional Partners:
dmdA_2
2%2C3-dimethylmalate dehydratase large subunit.
 
 0.995
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
 0.993
porA
Pyruvate synthase subunit porA.
  
 0.979
icd
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
 
 
 0.965
CUO06369.1
Predicted NADH:ubiquinone oxidoreductase%2C subunit RnfG.
  
 0.961
CUO25941.1
MmgE/PrpD family.
  
 
 0.948
puuB
Gamma-glutamylputrescine oxidoreductase.
  
 0.945
ttdA
L(+)-tartrate dehydratase subunit alpha.
  
 
 0.944
thlA
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.942
fumB
Fumarate hydratase class I%2C anaerobic.
  
 
 0.936
Your Current Organism:
Faecalicatena contorta
NCBI taxonomy Id: 39482
Other names: ATCC 25540, CCUG 52236, Catenabacterium contortum, DSM 3982, Eubacterium contortum, F. contorta, JCM 6483
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