STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO86157.1Uncharacterized protein conserved in bacteria. (258 aa)    
Predicted Functional Partners:
ybhF_11
Uncharacterized ABC transporter ATP-binding protein YbhF.
  
  0.895
phoR_9
Alkaline phosphatase synthesis sensor protein phoR.
       0.777
CUO10017.1
Uncharacterised protein.
  
 
 0.677
drrA_1
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
  
  0.557
ybhF_3
Uncharacterized ABC transporter ATP-binding protein YbhF.
  
  0.557
drrA_2
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
  
  0.557
ybhF_4
Uncharacterized ABC transporter ATP-binding protein YbhF.
  
  0.557
ybhF_8
Uncharacterized ABC transporter ATP-binding protein YbhF.
  
  0.557
metN2_1
Methionine import ATP-binding protein MetN 2.
  
  0.557
drrA_9
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
  
  0.557
Your Current Organism:
Faecalicatena contorta
NCBI taxonomy Id: 39482
Other names: ATCC 25540, CCUG 52236, Catenabacterium contortum, DSM 3982, Eubacterium contortum, F. contorta, JCM 6483
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