STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO87982.1Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain). (391 aa)    
Predicted Functional Partners:
bchI
Magnesium-chelatase 38 kDa subunit.
 
  
 0.937
CUO88001.1
Uncharacterized protein conserved in bacteria.
 
  
 0.933
CUO88776.1
Transglutaminase-like superfamily.
 
  
 0.824
CUO88720.1
Recombination factor protein RarA.
 
  
 0.736
CUO88048.1
Uncharacterised protein.
 
     0.718
CUO88095.1
Uncharacterised protein.
 
     0.674
ykoC
Putative HMP/thiamine permease protein YkoC.
 
    0.651
CUO87919.1
Uncharacterised protein.
       0.641
CUO87857.1
Outer membrane biogenesis protein BamB.
 
    0.598
CUO87837.1
Outer membrane biogenesis protein BamB.
 
    0.549
Your Current Organism:
Faecalicatena contorta
NCBI taxonomy Id: 39482
Other names: ATCC 25540, CCUG 52236, Catenabacterium contortum, DSM 3982, Eubacterium contortum, F. contorta, JCM 6483
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.