STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP03379.1Response regulator of the LytR/AlgR family. (150 aa)    
Predicted Functional Partners:
CUP03354.1
Predicted membrane protein (DUF2154).
 
    0.951
CUN68661.1
Two-component response regulator.
  
     0.712
pleD_3
Stalked cell differentiation-controlling protein.
    
 0.696
yehU_11
Probable sensor-like histidine kinase YehU.
  
 0.687
dtd
D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.
       0.472
CUO86878.1
Predicted signal transduction protein with a C-terminal ATPase domain.
  
 
  0.430
luxQ_3
Autoinducer 2 sensor kinase/phosphatase luxQ.
    
 0.429
barA_2
Signal transduction histidine-protein kinase BarA.
    
 0.429
rpfC_3
Sensory/regulatory protein RpfC.
    
 0.429
arcB_2
Aerobic respiration control sensor protein ArcB.
    
 0.411
Your Current Organism:
Faecalicatena contorta
NCBI taxonomy Id: 39482
Other names: ATCC 25540, CCUG 52236, Catenabacterium contortum, DSM 3982, Eubacterium contortum, F. contorta, JCM 6483
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