Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
fba_4 | fruA_3 | ERS852491_04189 | ERS852491_03714 | Fructose-bisphosphate aldolase. | EIIABC-Fru. | 0.875 |
fba_4 | gap | ERS852491_04189 | ERS852491_04297 | Fructose-bisphosphate aldolase. | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.969 |
fba_4 | pfkA | ERS852491_04189 | ERS852491_04436 | Fructose-bisphosphate aldolase. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | 0.898 |
fba_4 | pfp_2 | ERS852491_04189 | ERS852491_03083 | Fructose-bisphosphate aldolase. | Pyrophosphate--fructose 6-phosphate 1-phosphotransferase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily. | 0.890 |
fba_4 | pgi | ERS852491_04189 | ERS852491_03424 | Fructose-bisphosphate aldolase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.898 |
fba_4 | pgk | ERS852491_04189 | ERS852491_04298 | Fructose-bisphosphate aldolase. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.908 |
fba_4 | porA | ERS852491_04189 | ERS852491_03585 | Fructose-bisphosphate aldolase. | Pyruvate synthase subunit porA. | 0.952 |
fba_4 | pyk_1 | ERS852491_04189 | ERS852491_01673 | Fructose-bisphosphate aldolase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.897 |
fba_4 | tkt | ERS852491_04189 | ERS852491_02293 | Fructose-bisphosphate aldolase. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.904 |
fba_4 | tpiA | ERS852491_04189 | ERS852491_04299 | Fructose-bisphosphate aldolase. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.960 |
fruA_3 | fba_4 | ERS852491_03714 | ERS852491_04189 | EIIABC-Fru. | Fructose-bisphosphate aldolase. | 0.875 |
fruA_3 | gap | ERS852491_03714 | ERS852491_04297 | EIIABC-Fru. | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.443 |
fruA_3 | pgi | ERS852491_03714 | ERS852491_03424 | EIIABC-Fru. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.699 |
fruA_3 | pgk | ERS852491_03714 | ERS852491_04298 | EIIABC-Fru. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.513 |
fruA_3 | pyk_1 | ERS852491_03714 | ERS852491_01673 | EIIABC-Fru. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.604 |
fruA_3 | tkt | ERS852491_03714 | ERS852491_02293 | EIIABC-Fru. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.653 |
fruA_3 | tpiA | ERS852491_03714 | ERS852491_04299 | EIIABC-Fru. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.597 |
gap | fba_4 | ERS852491_04297 | ERS852491_04189 | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Fructose-bisphosphate aldolase. | 0.969 |
gap | fruA_3 | ERS852491_04297 | ERS852491_03714 | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | EIIABC-Fru. | 0.443 |
gap | pfkA | ERS852491_04297 | ERS852491_04436 | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | 0.774 |
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