STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kdsDArabinose 5-phosphate isomerase KdsD. (209 aa)    
Predicted Functional Partners:
CUO23063.1
3-hexulose-6-phosphate synthase.
  
 
 0.860
CUP15817.1
Aminoimidazole riboside kinase.
  
    0.659
pgcA
Phosphoglucomutase.
  
   0.621
CUP15754.1
Phosphorylated carbohydrates phosphatase TM_1254.
       0.515
yrbG
Inner membrane protein yrbG.
    
 0.489
tkt
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
  
 
 0.482
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.478
ino1_1
Inositol-3-phosphate synthase.
       0.431
rpiB_3
Ribose-5-phosphate isomerase B.
  
 
  0.412
algC
Phosphomannomutase/phosphoglucomutase.
  
   0.404
Your Current Organism:
Faecalicatena contorta
NCBI taxonomy Id: 39482
Other names: ATCC 25540, CCUG 52236, Catenabacterium contortum, DSM 3982, Eubacterium contortum, F. contorta, JCM 6483
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