Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUP11664.1 | ftsW_3 | ERS852491_04305 | ERS852491_04460 | Uncharacterised protein. | Cell division protein FtsW; Belongs to the SEDS family. | 0.482 |
CUP11664.1 | mraY | ERS852491_04305 | ERS852491_04458 | Uncharacterised protein. | Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.915 |
CUP11664.1 | murC | ERS852491_04305 | ERS852491_01646 | Uncharacterised protein. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.883 |
CUP11664.1 | murD | ERS852491_04305 | ERS852491_04459 | Uncharacterised protein. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.907 |
CUP11664.1 | murE | ERS852491_04305 | ERS852491_00496 | Uncharacterised protein. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-- 2%2C6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.850 |
CUP11664.1 | murG | ERS852491_04305 | ERS852491_03429 | Uncharacterised protein. | Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.862 |
ftsW_3 | CUP11664.1 | ERS852491_04460 | ERS852491_04305 | Cell division protein FtsW; Belongs to the SEDS family. | Uncharacterised protein. | 0.482 |
ftsW_3 | mraY | ERS852491_04460 | ERS852491_04458 | Cell division protein FtsW; Belongs to the SEDS family. | Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.971 |
ftsW_3 | murAB | ERS852491_04460 | ERS852491_04933 | Cell division protein FtsW; Belongs to the SEDS family. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.803 |
ftsW_3 | murC | ERS852491_04460 | ERS852491_01646 | Cell division protein FtsW; Belongs to the SEDS family. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.902 |
ftsW_3 | murD | ERS852491_04460 | ERS852491_04459 | Cell division protein FtsW; Belongs to the SEDS family. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.976 |
ftsW_3 | murE | ERS852491_04460 | ERS852491_00496 | Cell division protein FtsW; Belongs to the SEDS family. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-- 2%2C6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.686 |
ftsW_3 | murF | ERS852491_04460 | ERS852491_00878 | Cell division protein FtsW; Belongs to the SEDS family. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.850 |
ftsW_3 | murG | ERS852491_04460 | ERS852491_03429 | Cell division protein FtsW; Belongs to the SEDS family. | Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.942 |
ftsW_3 | penA_3 | ERS852491_04460 | ERS852491_04457 | Cell division protein FtsW; Belongs to the SEDS family. | Penicillin-binding protein 2. | 0.978 |
kfoC_1 | mraY | ERS852491_02165 | ERS852491_04458 | Chondroitin polymerase. | Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.905 |
kfoC_1 | murG | ERS852491_02165 | ERS852491_03429 | Chondroitin polymerase. | Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.420 |
mraY | CUP11664.1 | ERS852491_04458 | ERS852491_04305 | Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | Uncharacterised protein. | 0.915 |
mraY | ftsW_3 | ERS852491_04458 | ERS852491_04460 | Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | Cell division protein FtsW; Belongs to the SEDS family. | 0.971 |
mraY | kfoC_1 | ERS852491_04458 | ERS852491_02165 | Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | Chondroitin polymerase. | 0.905 |
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