STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP20816.1Bacteriophage Gp15 protein. (204 aa)    
Predicted Functional Partners:
CUP20603.1
Phage minor capsid protein 2.
 
    0.811
CUP27850.1
Phage minor capsid protein 2.
 
    0.811
CUO11427.1
Phage portal protein%2C putative%2C A118 family.
 
    0.803
CUP20573.1
Phage portal protein%2C putative%2C A118 family.
 
    0.803
CUP27815.1
Phage portal protein%2C putative%2C A118 family.
 
    0.803
CUP27778.1
Phage terminase%2C large subunit%2C PBSX family.
 
    0.788
CUP20792.1
Uncharacterised protein.
       0.787
CUP20555.1
Phage terminase%2C large subunit%2C PBSX family.
 
    0.754
CUP20835.1
Phage-related minor tail protein.
 
     0.746
CUP20694.1
Uncharacterised protein.
       0.646
Your Current Organism:
Faecalicatena contorta
NCBI taxonomy Id: 39482
Other names: ATCC 25540, CCUG 52236, Catenabacterium contortum, DSM 3982, Eubacterium contortum, F. contorta, JCM 6483
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