Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUO18095.1 | CUP41282.1 | ERS852491_01501 | ERS852491_05089 | Predicted outer membrane protein. | Uncharacterised protein. | 0.770 |
CUO18095.1 | CUP41477.1 | ERS852491_01501 | ERS852491_05094 | Predicted outer membrane protein. | Uncharacterised protein. | 0.770 |
CUO18095.1 | iap_4 | ERS852491_01501 | ERS852491_05091 | Predicted outer membrane protein. | Probable endopeptidase p60 precursor. | 0.797 |
CUP41282.1 | CUO18095.1 | ERS852491_05089 | ERS852491_01501 | Uncharacterised protein. | Predicted outer membrane protein. | 0.770 |
CUP41282.1 | iap_4 | ERS852491_05089 | ERS852491_05091 | Uncharacterised protein. | Probable endopeptidase p60 precursor. | 0.934 |
CUP41477.1 | CUO18095.1 | ERS852491_05094 | ERS852491_01501 | Uncharacterised protein. | Predicted outer membrane protein. | 0.770 |
CUP41477.1 | iap_4 | ERS852491_05094 | ERS852491_05091 | Uncharacterised protein. | Probable endopeptidase p60 precursor. | 0.825 |
blaI | blaR1 | ERS852491_01764 | ERS852491_01765 | Regulatory protein BlaI. | Regulatory protein BlaR1. | 0.997 |
blaI | iap_4 | ERS852491_01764 | ERS852491_05091 | Regulatory protein BlaI. | Probable endopeptidase p60 precursor. | 0.819 |
blaR1 | blaI | ERS852491_01765 | ERS852491_01764 | Regulatory protein BlaR1. | Regulatory protein BlaI. | 0.997 |
blaR1 | iap_4 | ERS852491_01765 | ERS852491_05091 | Regulatory protein BlaR1. | Probable endopeptidase p60 precursor. | 0.835 |
guaA_1 | guaA_2 | ERS852491_02115 | ERS852491_04355 | GMP synthase [glutamine-hydrolyzing]. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.917 |
guaA_1 | guaB | ERS852491_02115 | ERS852491_01865 | GMP synthase [glutamine-hydrolyzing]. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.999 |
guaA_1 | iap_4 | ERS852491_02115 | ERS852491_05091 | GMP synthase [glutamine-hydrolyzing]. | Probable endopeptidase p60 precursor. | 0.853 |
guaA_2 | guaA_1 | ERS852491_04355 | ERS852491_02115 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | GMP synthase [glutamine-hydrolyzing]. | 0.917 |
guaA_2 | guaB | ERS852491_04355 | ERS852491_01865 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.999 |
guaA_2 | iap_4 | ERS852491_04355 | ERS852491_05091 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | Probable endopeptidase p60 precursor. | 0.853 |
guaB | guaA_1 | ERS852491_01865 | ERS852491_02115 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | GMP synthase [glutamine-hydrolyzing]. | 0.999 |
guaB | guaA_2 | ERS852491_01865 | ERS852491_04355 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.999 |
guaB | iap_4 | ERS852491_01865 | ERS852491_05091 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Probable endopeptidase p60 precursor. | 0.823 |
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