STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUN60495.1HNH endonuclease. (117 aa)    
Predicted Functional Partners:
CUN60972.1
Phage terminase-like protein%2C large subunit.
 
  
 0.890
CUN60925.1
Phage terminase%2C small subunit.
 
    0.870
CUN61022.1
Phage portal protein%2C HK97 family.
 
  
 0.859
CUN60573.1
Putative methylase.
 
  
 0.805
CUN60529.1
Uncharacterised protein.
 
    0.803
CUN61145.1
Predicted phage phi-C31 gp36 major capsid-like protein.
 
    0.781
CUN61245.1
Bacteriophage head-tail adaptor.
 
    0.747
CUN60606.1
Uncharacterised protein.
 
     0.724
clpP1
ATP-dependent Clp protease proteolytic subunit 1.
 
    0.689
CUN59824.1
Uncharacterised protein.
 
     0.638
Your Current Organism:
Anaerobutyricum hallii
NCBI taxonomy Id: 39488
Other names: A. hallii, ATCC 27751, DSM 3353, Eubacterium hallii, VPI B4-27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.