STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
swrCSwarming motility protein SwrC; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1295 aa)    
Predicted Functional Partners:
amiC_1
N-acetylmuramoyl-L-alanine amidase AmiC precursor.
  
 
 0.869
CUO92041.1
Uncharacterised protein.
  
 
 0.869
CUO33108.1
Putative membrane fusion protein.
  
 
 0.853
CUP10335.1
Efflux transporter%2C RND family%2C MFP subunit.
  
 
 0.853
CUP10409.1
Putative efflux pump membrane fusion protein.
  
 
 0.853
yajC
Preprotein translocase subunit YajC.
   
 
 0.764
scpA
Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.740
recQ
ATP-dependent DNA helicase recQ.
 
 
 0.566
iap
Probable endopeptidase p60 precursor.
     
 0.562
rpfC_1
Sensory/regulatory protein RpfC.
 
 
 
 0.560
Your Current Organism:
Anaerobutyricum hallii
NCBI taxonomy Id: 39488
Other names: A. hallii, ATCC 27751, DSM 3353, Eubacterium hallii, VPI B4-27
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.