STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUN78597.1Uncharacterized response regulatory protein SA0215. (532 aa)    
Predicted Functional Partners:
yehU_1
Probable sensor-like histidine kinase YehU.
  
 0.954
CUN78485.1
TMAO reductase system periplasmic protein TorT.
 
     0.882
mglB_1
D-galactose/ D-glucose-binding protein.
 
     0.839
mglC
Galactoside transport system permease protein mglC.
 
     0.773
yehU_2
Probable sensor-like histidine kinase YehU.
  
 0.763
mglB_2
D-galactose/ D-glucose-binding protein.
 
     0.746
mglB_3
D-galactose/ D-glucose-binding protein.
 
     0.711
mglA_1
Galactose/methyl galactoside import ATP-binding protein MglA.
 
    0.644
CUP16660.1
Uncharacterised protein.
   
 
 0.540
ypdA
Inner membrane protein ypdA.
 
  
 0.477
Your Current Organism:
Anaerobutyricum hallii
NCBI taxonomy Id: 39488
Other names: A. hallii, ATCC 27751, DSM 3353, Eubacterium hallii, VPI B4-27
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.