STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugpC_1Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily. (389 aa)    
Predicted Functional Partners:
ycjO
Inner membrane ABC transporter permease protein ycjO.
 
 0.998
ycjP
Inner membrane ABC transporter permease protein ycjP.
 
 0.994
CUO01035.1
Maltose-binding periplasmic proteins/domains.
 
 0.944
nikC
Nickel transport system permease protein nikC.
 
    
 0.651
modB
Molybdenum transport system permease protein modB; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
      0.636
CUO04317.1
Maltose-binding periplasmic proteins/domains.
  
 
 0.629
glnP
Glutamine transport system permease protein glnP.
 
  
 0.625
CUP08669.1
Maltose-binding periplasmic proteins/domains.
  
 
 0.623
CUO51661.1
Maltose-binding periplasmic proteins/domains.
  
 
 0.616
CUO75430.1
Maltose-binding periplasmic proteins/domains.
  
 
 0.616
Your Current Organism:
Anaerobutyricum hallii
NCBI taxonomy Id: 39488
Other names: A. hallii, ATCC 27751, DSM 3353, Eubacterium hallii, VPI B4-27
Server load: low (22%) [HD]