STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parB_3Probable chromosome-partitioning protein parB; Belongs to the ParB family. (300 aa)    
Predicted Functional Partners:
soj_3
Sporulation initiation inhibitor protein soj.
 
   0.968
CUO08409.1
Replication initiator protein A (RepA) N-terminus.
 
     0.871
soj_1
Sporulation initiation inhibitor protein soj.
 
   0.852
soj_4
Sporulation initiation inhibitor protein soj.
 
   0.813
soj_2
Sporulation initiation inhibitor protein soj.
 
   0.802
soj_5
Sporulation initiation inhibitor protein soj.
 
   0.791
soj_6
Sporulation initiation inhibitor protein soj.
 
   0.784
noc_2
Nucleoid occlusion protein; Belongs to the ParB family.
 
    
0.773
CUO09131.1
Relaxase/Mobilisation nuclease domain.
 
    0.655
CUO09155.1
Bacterial mobilisation protein (MobC).
  
    0.613
Your Current Organism:
Anaerobutyricum hallii
NCBI taxonomy Id: 39488
Other names: A. hallii, ATCC 27751, DSM 3353, Eubacterium hallii, VPI B4-27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.