STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO09155.1Bacterial mobilisation protein (MobC). (128 aa)    
Predicted Functional Partners:
CUO09131.1
Relaxase/Mobilisation nuclease domain.
 
    0.959
CUO08409.1
Replication initiator protein A (RepA) N-terminus.
  
     0.761
CUN93815.1
DNA repair protein RadA.
 
     0.692
CUN93356.1
Predicted outer membrane protein.
  
     0.682
CUO55655.1
Uncharacterised protein.
 
   
 0.639
parB_3
Probable chromosome-partitioning protein parB; Belongs to the ParB family.
  
    0.613
CUN93980.1
Uncharacterised protein.
  
     0.512
CUO80015.1
Relaxase/Mobilisation nuclease domain.
 
    0.493
mobA
DNA strand transferase.
 
    0.492
CUO75522.1
Bacterial extracellular solute-binding proteins%2C family 3.
  
     0.484
Your Current Organism:
Anaerobutyricum hallii
NCBI taxonomy Id: 39488
Other names: A. hallii, ATCC 27751, DSM 3353, Eubacterium hallii, VPI B4-27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.