Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
aroB | rpiA | ERS852450_01619 | ERS852450_01258 | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | Ribose-5-phosphate isomerase A. | 0.621 |
dxs_1 | rpe | ERS852450_00680 | ERS852450_01077 | 1-deoxy-D-xylulose-5-phosphate synthase. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.942 |
dxs_1 | rpiA | ERS852450_00680 | ERS852450_01258 | 1-deoxy-D-xylulose-5-phosphate synthase. | Ribose-5-phosphate isomerase A. | 0.518 |
dxs_1 | tkt | ERS852450_00680 | ERS852450_02168 | 1-deoxy-D-xylulose-5-phosphate synthase. | Transketolase. | 0.993 |
dxs_1 | tktA_1 | ERS852450_00680 | ERS852450_00681 | 1-deoxy-D-xylulose-5-phosphate synthase. | Transketolase 1. | 0.999 |
dxs_1 | tktA_2 | ERS852450_00680 | ERS852450_01498 | 1-deoxy-D-xylulose-5-phosphate synthase. | Transketolase 1. | 0.993 |
dxs_2 | rpe | ERS852450_01497 | ERS852450_01077 | 1-deoxy-D-xylulose-5-phosphate synthase. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.727 |
dxs_2 | rpiA | ERS852450_01497 | ERS852450_01258 | 1-deoxy-D-xylulose-5-phosphate synthase. | Ribose-5-phosphate isomerase A. | 0.518 |
dxs_2 | tkt | ERS852450_01497 | ERS852450_02168 | 1-deoxy-D-xylulose-5-phosphate synthase. | Transketolase. | 0.993 |
dxs_2 | tktA_1 | ERS852450_01497 | ERS852450_00681 | 1-deoxy-D-xylulose-5-phosphate synthase. | Transketolase 1. | 0.993 |
dxs_2 | tktA_2 | ERS852450_01497 | ERS852450_01498 | 1-deoxy-D-xylulose-5-phosphate synthase. | Transketolase 1. | 0.998 |
dxs_4 | rpe | ERS852450_02167 | ERS852450_01077 | 1-deoxy-D-xylulose-5-phosphate synthase. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.672 |
dxs_4 | rpiA | ERS852450_02167 | ERS852450_01258 | 1-deoxy-D-xylulose-5-phosphate synthase. | Ribose-5-phosphate isomerase A. | 0.518 |
dxs_4 | tkt | ERS852450_02167 | ERS852450_02168 | 1-deoxy-D-xylulose-5-phosphate synthase. | Transketolase. | 0.998 |
dxs_4 | tktA_1 | ERS852450_02167 | ERS852450_00681 | 1-deoxy-D-xylulose-5-phosphate synthase. | Transketolase 1. | 0.993 |
dxs_4 | tktA_2 | ERS852450_02167 | ERS852450_01498 | 1-deoxy-D-xylulose-5-phosphate synthase. | Transketolase 1. | 0.993 |
fruA_2 | rpe | ERS852450_01259 | ERS852450_01077 | EIIABC-Fru. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.770 |
fruA_2 | rpiA | ERS852450_01259 | ERS852450_01258 | EIIABC-Fru. | Ribose-5-phosphate isomerase A. | 0.565 |
guaA_2 | rpe | ERS852450_00909 | ERS852450_01077 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.556 |
guaA_2 | rpiA | ERS852450_00909 | ERS852450_01258 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | Ribose-5-phosphate isomerase A. | 0.527 |
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