STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yehU_3Probable sensor-like histidine kinase YehU. (411 aa)    
Predicted Functional Partners:
araC
Arabinose operon regulatory protein.
  
 0.951
luxQ_1
Autoinducer 2 sensor kinase/phosphatase luxQ.
 
      0.883
metH_3
Methionine synthase.
      0.771
adhE_2
Aldehyde-alcohol dehydrogenase.
     
 0.749
CUO22241.1
Propanediol utilization protein PduB.
 
    0.727
yvqK
Cob(I)yrinic acid a%2Cc-diamide adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
 
  
 0.710
CUN98477.1
Two-component response regulator.
 
  
 0.702
rpfC_1
Sensory/regulatory protein RpfC.
 
  
 0.658
CUP08594.1
Uncharacterized response regulatory protein SA0215.
  
 0.602
pduA_1
Propanediol utilization protein PduA.
 
   
 0.551
Your Current Organism:
Anaerobutyricum hallii
NCBI taxonomy Id: 39488
Other names: A. hallii, ATCC 27751, DSM 3353, Eubacterium hallii, VPI B4-27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.