STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hgdC_32-hydroxyglutaryl-CoA dehydratase component A. (1521 aa)    
Predicted Functional Partners:
CUN85744.1
Predicted membrane protein.
 
     0.702
hgdB
(R)-2-hydroxyglutaryl-CoA dehydratase subunit beta.
  
 
 0.662
hgdC_2
2-hydroxyglutaryl-CoA dehydratase component A.
 
   
0.662
CUN82600.1
Predicted membrane protein.
 
     0.544
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
  
 0.488
queH
Uncharacterized BCR%2C COG1636; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).
 
     0.437
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
  
    0.430
CUN68644.1
Stage V sporulation protein AC.
  
    0.414
Your Current Organism:
Anaerobutyricum hallii
NCBI taxonomy Id: 39488
Other names: A. hallii, ATCC 27751, DSM 3353, Eubacterium hallii, VPI B4-27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.